Attractors


Attractors are the elements of nonlinear dynamics. An attractor is a piece of space. When an object enters, it does not exit unless a substantial force is applied to it. The simplest attractor is the fixed point. Some fixed points have spiral paths and some are more direct. Limit cycles and chaotic attractors are more complex in their movements over time, but they have the same level of structural stability. Structural stability means that all objects in the space are moving around according to the same rules.
Oscillators, also known as limit cycles, are another type of attractor. Like the moon revolving around the early, once an object gets too close to the limit cycle it continues to orbit indefinitely or until a substantial force is applied. Oscillators can be pure and simple, or dampened to a fixed point by means of a control parameter. They can also be perturbed in the opposite direction to become aperiodic oscillators. There is a gradual transition from aperiodic produce a chaotic time series. A control parameter is similar to an independent variable in conventional research. Here it has the effect of altering the dynamics of the order parameter, which is similar in meaning to a dependent variable, except that it is not necessarily dependent. Order parameters within a system operate on their own intrinsic dynamics. Repellors are like attractors, but they work backwards. Objects that veer too close to them are pushed outward and can go anywhere, so long as they go away. This property of an indeterminable final outcome is what makes repellors unstable. Fixed points and oscillators, in contrast, are stable. Chaotic attractors (described below) are also stable in spite of their popular association with unpredictability. A saddle has mixed properties of an attractor and a repellor. Objects are drawn to it, but are pushed away once they arrive. An example is the perturbed pendulum shown at the right. A saddle is also unstable. 
Bifurcations


Bifurcations are splits in a dynamic field that can occur when an
attractor changes from one type to another, or where different
dynamics are occurring in juxtaposing pieces of space. They
can even produce the appearance and disappearance of new
attractors. Bifurcations are patterns of instability that can be as
simple as a critical point, curved trajectories, or more complex in
structure. One or more control parameters is often involved to
change the system from one regime to the next.
The logistic map is one of the classic bifurcations. It was first
introduced to solve a problem in population dynamics and has
seen a variety of applications since then. Start with the function
X2
= CX1 (1  X1 ), with X1 and C in the range between 0 and 1.
Calculate X2 and run it through the equation again to produce X3, then
repeat a few more times. When C is
small, the results stay within a steady
state. When C becomes somewhat larger
(let it become gradually larger
than 1.0), X goes into oscillations.
As C becomes larger still, the
oscillations
become more complex (period doubling). When C = 3.6, the output is
chaotic.
The chaotic regime is rendered as a jumble of interlaced trajectories. The vertical striations are intentional. There are brief episodes of calm within the overal turmoil. Bifurcations are often experienced as critical points or tipping points. They are a critical feature of catastrophe models. 
Introduction to Chaos by Larry Liebovitch. This online presention provides a rapid coverage of the basis principles of Chaos Theory in an illuminating set of Powerpoint slides.
Chaos Demonstrations by Clauswitz.com. Video clips and FLASH APPS for the Lorenz Attractor, Brownian Motion, 3 Body Problem, Double Pendulum, Perturbed Pendulum, Logistic Map and Bifurcation, The Game of Life, Complex Adaptive Systems, and more!
Nonlinear Dynamics and Chaos: A Lab Demonstration Stephen H. Strogatz. Video demonstrates various chaotic systems and applications: double pendulum, water flows, aircraft wing design, electronic signal processing, and chaotic music.
Lorenz Attractor in 3D Images by Paul Bourke.
Simple model of the Lorenz Attractor. [video]. Watch the attractor evolve and develop over time.
Interactive Lorenz Attractor by Malin Christersson. See the full range of Lorenz Attractor dynamics in 3D with this interactive display. Change parameters, or grab the image
Chaos


Chaos is a particular nonlinear dynamic wherein seemingly random events
are actually predictable from simple deterministic equations. Thus, a
phenomenon that appears unpredictable in the short term may indeed be
globally stable in the long term. It will exhibit clear boundaries and display
sensitivity to initial conditions. Small differences in initial states
eventually
compound to produce markedly different end states later on in time. The
latter property is also known as The Butterfly Effect and was first discovered
by Edward Lorenz during an investigation of weather patterns.
Chaos has some important connections and relationships to other dynamics, however, such as attractors, bifurcations, fractals, and selforganization. Not all examples of chaos are chaotic attractors, but several dozen structures for chaotic attractors are known, however. A chaotic attractor has the stability characteristic of the simpler attractors that were already described because all the points within the attractor and moving according to the same rule. The movements within the attractor basin are chaotic, and they contain both expanding and contracting movements. The paths of motion expend to the outer rim, then back again toward the center  a pattern that can be observed in schools of fish or flocks of birds. The famous Lorenz attractor is shown at the right. A point moves along any of the trajectories on one lobe, but suddenly switches to the other lobe. The transition from one lobe to the other is as random as flipping a coin  with the exception that it is a fully deterministic process instead. The Lorenz attractor is a system of three order paramters (movements along X, Y, and Z cartesean coordinates) and three control paramters. The control parameters goven the amount of spread between the lobes and their orientation along the cartesean axes. There are a few pathways by which a nonchaotic system can become chaotic. One is to induce bifurcations, an example of which was already described with the logistic map. Another pathway is to couple oscillators together. One oscillator acts as a control parameter that drives another oscillator. A third option is to create a field with multiple fixed point attractors close together and send an object into the field. The latter example actually captures the three body problem that Henri Poincare was studying in the 1890s when he first discovered what we call chaos today. The word chaos did not appear in the system science vocabulary until the 1970s, however. 
Introduction to Fractals by Larry Liebovitch. Presentation provides a rapid coverage of the basic principles of Fractals and Selfsimilarity in an illuminating set of Powerpoint slides.
More About Fractals and Scaling by Larry Liebovitch. This online presentation covers some of the basic dynamical underpinnings of selfsimilarity.
The Mandelbrot Set by Malin Christersson. An iconic fractal that can be viewed at different levels of scale with this interactive display.
Fractals


A fractal is a geometric form in a noninteger number of dimensions, meaning that they do not fill up a whole 2D or 3D space. Fractals also have selfrepeating structures. The same overall pattern is visible if we zoom in or out to different levels of scale. Their essential structures can be found in many examples in nature  the shapes of snowflakes, vegetable, lightning, neural structures. Why are they so visually engaging?
J. C. Sprott's Fractal of the Day website, shown at the right, changes every day at midnight, US Central Time. It deploys two basic algorithms. One selects a fractal structure, and the second evaluates the design for its level of complexity and other aesthetic properties. Please visit the archives, which can be reached by tracing the link. Fractal analysis can also be used to assess and compare the complexity of visual images such as abstract art works. One of the more practical fractal functions is diffusion limited aggregation. This concept has been used to map the flow of contagious diseases across physical space. The pathogen spreads quickly down a central pathway, then fans out in multiple directions, then dissipates. The principle is more difficult to apply, however, when the pathogen spreads by means of a global transportation rather than simple physical proximity. There is an important connection between fractal structure and chaos: The basin, or outer boundary of a chaotic attractor is a fractal. This discovery quickly led to the calculation of a fractal dimensions in time series data, which were in turn used to characterize the complexity of a time series of biometric or psychological data. In principle, it should be possible to find a fractal structure at one level of scale that repeats at other (finer, broader) levels of scale. At one point in history, it was thought that the presence of a fractal structure in a time series was a clear indication that the time series was chaotic. This assumption turned out to be an oversimplification, however. A chaotic time series is composed of expanding and contracting segments. A much better "test for chaos" is the Lyapunov exponent associated with the time series. A Lyapunov exponent is actually a spectrum of values that is computed from the sequential differences numbers in a time series. A positive exponent indicates expansion, and a negative value indicates contraction toward a fixed point. A perfect 0.0 indicates a pure oscillator, which, in practice could be a little bit perturbed in the chaotic direction or dampened in the direction of a fixed point. The decision about the dynamic character of a time series is drawn from the largest Lyapunov exponent, which should be positive, while the sum of the other values should be negative. Conveniently, the largest Lyapunov exponent can be converted to a fractal dimension. Fractal dimensions between 0 and 1.0 indicate gravitation toward a fixed point. A value of 1.0 could indicate either a line or a perfect oscillator. Values between 1.0 and 2.0 are usually interpreted as the range of selforganized criticality, which reflects a balance between order and chaos. The connection between fractal structures, selforganization, and emergent events, which is developed later on in conjunction with selforganization. Fractal dimensions between 2.0 and 3.0 are chaotic, but with a bias toward relatively small fluctuations over time that are perforated by a few large ones. An example would be the flight path of a bird of prey that is checking out its terrain suddenly swoops down to the group to check out something delicious. Humans adopt a similar pattern in a grocery store, probably without thinking about it. The caveat here, however, is that grocery stores are much more organized than the critters running through the woods. The grocery store wants us to find what we are looking for; the critters do not want to be found by the hawk. Fractal dimensions greater than 3.0 are chaotic. One more caveat, however, is that there are many wellknown chaotic attractors with fractal dimensions less than 3.0 and closer to 2.0. Not all examples of chaos are chaotic attractors. 
FRACTAL OF DAY LIVE FEED HERE Fractal of the Day

The Catastrophe Teacher by Lucien Dujardin. An Introduction to catastrophe theory for the experimentalist. Explores all seven models in the set of elementary catastrophe models.
Catastrophe Machine prepared by the American Mathermatical Society, based on Zeeman's original.
Catastrophes


Catastrophes are sudden changes in events; they are not necessarily bad or unwanted events as the word "catastrophe" (in English) might suggest. Catastrophe models contain combinations of attractors, repellors, saddles, and bifurcations. According to the classification theorem developed by Rene Thom, all discontinuous changes of events can be described by one of seven elementary topological models. The models are hierarchical such that the simpler ones are embedded in the larger ones.
The simplest model is the fold catastrophe. It describe transitions between a stable state (attractor) and an unstable state. The shift between the two modalities is governed by one control parameter (aka independent variable). When the value of that parameter reaches a critical point, the system moves into the attractor state, or out of it. Each catastrophe model contains a bifurcation set. In fold model, the bifurcation set consists of a single critical point. The catastrophe models are polynomial structures. The leading polynomial for the fold response surface is a quadratic term, such that f(y)/dy = y2  a, in which a is the control parameter and y is the observed behavior variable (aka, the dependent measure). The catastrophe models also have a potential function, which char acterizes the behavior of agents that are acting within the model as positions rather than velocities. In other words, to represent a velocity we would say f(y)/dy or dy/dt (t = time). To represent the potential function we would integrate the response surface function; thus for a fold, f(y)= y3  ay. The cusp model is the secondsimplest in the series  just complex enough to be very interesting and uniquely useful. In fact it is over whelmingly the most popular catastrophe model in the behavioral sciences. The cusp requires two control parameters, asymmetry and bifurcation. To visualize the dynamics, start at the stable state on the left and follow the outer rim of the surface where bifurcation is high. If we change the value of the asymmetry parameter, nothing happens until it reaches a critical point, at which we have a sudden change in behavior: the control point that indicates what behavior is operating flips to the upper sheet of the surface. A similar reverse process occurs when shifting from the upper to the lower stable state. When bifurcation is low, change is relatively smooth. The cusp point is a saddle, and is the most instable location on the surface. With only a slight nudge it moves toward one of the stable attractor states. The paths drawn in light blue are gradients that are created by the two control variables. The red spot indicates the presence of a repellor; comparatively few points land there. The cusp is often drawn with its bifurcation set, which is essentially a 2dimensional shadow of the response surface. Therein you can see the two gradients that are joined at a cusp point. In the application to occupational accidents shown in the diagram, there were several psychosocial variables that contributed to the bifurcation parameter. Some had a netnegative "influence" to them, and others had a positive "influence". Together the gradient variables capture the range of movements that are possible along the bifurcation manifold. The leading polynomial for the cusp response surface is a cubic term, such that f(y)/dy = y3  by  a, in which a is the asymmetry parameter and b is the bifurcation parameter. Its potential function is f(y) = y4  by2  ay. The swallowtail catastrophe model shows movement along a 4 dimensional response surface that must be shown in two 3D sections. The leading polynomial for its response surface is a quartic polynomial: f(y)/dy = y4  cy2  by  a. When the asymmetry parameter, a, is low in value, objects on the surface can move from an unstable state to a more interesting part of the surface (shown in the upper portion of the figure to the right) where the stable states are located. The bifurcation parameter, b, determines whether points will move from the back of the surface to the front regions where the stable states are located. Points can jump between the two stable states, or they can fall through a cleavage in the surface back to the unstable state (low a). The bias parameter, c, determines whether a point reaches one or the other stable state. The next four catastrophe models are more complex in structure, and thus have seen a lot fewer applications in the social sciences compared to cusps. Briefly, however, the butterfly catastrophe describes movement along a 5dimensional response surface. It contains three stable states with repellors in between. Points of objects can move between adjacent states in cusplike fashion, or between disparate states in a more complex fashion. The model has four control parameters. The first three are asymmetry, bifurcations, and hears again. The fourth is the butterfly parameter which defeats the relationship between the hears and the bifurcation parameters. The last three catastrophes belong to the umbilic catastrophe group. They are distinguished by having 2 dependent measures (or order parameters). The wave crest (or hyperbolic umbilic) model consists of two foldlike variables that are controlled in part by the same bifurcation parameter. Each behavior has its own asymmetry parameter. The hair (or eliptic umbilic) model has similar properties as the wave crest, with the important addition that there is an interaction between the two dependent variables. It gets its name from its bifurcation set, which depicts three trajectories coming together at a hairthin intersection then fanning out again.The mushroom (or parabolic umbilic) model has one dependent measure that follows cusplike dynamics between two stable states and one dependent measure that follows foldlike dynamics. The model contains four control parameters, and there is an interaction between the two dependent variables. 
Complex Systems Demonstration Programs by Robert Goldstone. Predatoryprey relationships, Hebbian learning, and more.
NK Rugged Landscape [PDF]  a tutorial by Kevin Dooley
Please scroll down for more links and their accompanying narratives.
SelfOrganization


A system that is in a state of chaos, high entropy, or farfromequilibrium
conditions would exhibit highdimensional changes in behavior patterns
over time, but not indefinitely so. Systems in that state tend to adopt new
structures that produce Selforganization is sometimes known as "order for
free" because systems acquire their patterns of behavior without any input
from outside sources.
There are four commonly acknowledged models of selforganization: synergetics, introduced by Herman Haken; the rugged landscape, which was introduced by Stuart Kauffman; the sandpile, introduced by Per Bak; and multiple basin dynamics, introduced by James Crutchfield. What they all have in common is that the system selforganizes in response to the flow of information from one subsystem to another. In this regard the principles build on the concepts of cybernetics that were introduced in the early 1960s, and John von Neumann's principle of artificial life: all life can be expressed as the flow of information. The basic synergetic building block is the driverslave relationship, which can be portrayed with simple circles and arrows. The driver behaves over time (produces output or information) according to some temporal dynamic such as an oscillation or chaos. The driver's output acts a control parameter for to an adjacent subsystem, which one the one hand responds to the temporal dynamics from the driver and produces its own temporal output. In the simple case, the driverslave relationship is unidirectional. In other cases, such as when effective communication and coordination occur between two people, the relationships are bidirectional. A larger system would contain more circles and arrows. What we want to know, however, is what do the arrows mean? This is where the dynamics are of great importance. Once patterns form and reduce internal entropy, the structures maintain for a while until a perturbation of sufficient strength occurs that disrupts the flow. The system adapts again to accommodate the nuances in some fashion, either through smallscale and gradual change or a marked reorganization. The latter is a phase shift. For instance, a person might be experiencing a medical or psychological pathology that is unfortunately stable, and thus prone to continue, until there is an intervention. The intervention takes some time to be effective but the system eventually breaks up its old form of organization and adopts a new one. The phase shift in the system is akin to water turning to ice or to vapor, or vice versa. The challenge is to predict when the change will occur. There is a sudden burst of entropy in the system just before the change takes place, which the researcher (therapist, manager) would want to measure and monitor. A concise intervention at the critical point could have a large impact on what happens to the system next.An important connection here is that the phase shift that occurs in selforganizing phenomena is a cusp catastrophe function. Researchers do not always describe it as such, but the equation they generally use to depict the process is the potential function for the cusp; the only difference is that sometimes the researchers hold the bifurcation variable constant rather than a variable that is manipulated or measured. The red ball in the phase shift diagram indicates the state the system is in. In the top portion of the diagram it is stuck in a well that represents an attractor. When sufficient energy or force is applied, the ball comes out of the well and with just enough of a push moved into the second well. In some situations we know what well we're stuck in, but not necessarily what well we want to visit next. The question of how to form a new attractor state is a challenge in its own right. For the rugged landscape scenario, imagine that a species of organism is located on the top of a mountain in a comfortable ecological niche. The organisms have numerous individual differences in traits that are not relevant to survival. Then one day something happens and the organisms need to leave their old niche and find new ones on the rugged landscape, so they do. In some niches, they only need one or two traits to function effectively. For other possible niches, they need several traits. As one might guess, there will be more organism living in a new 1trait environment, not as many in a 2trait environment, and so on. Figure 9 is a distribution of K, the number of traits required, and N the number of organisms exhibiting that many traits in the new environment. It is also interesting that there is a niche at the highK end of the graph that seems to contain a large number of new inhabitants. The niches in the landscape can also be depicted as having higher and lower elevation levels, where the highest elevation reflects high fitness for the inhabiting organism, and lower elevations for less fit locations. Organisms thus engage in some exploration strategies to search out better niches. Niches have higher elevations to the extent that there are many forms of interaction taking place among the organisms in the niche. The rugged landscape idea became a popular metaphor for business strategies in the 1990s. For further elaboration, see Kevin Dooley's linked contribution on rugged landscapes. For the avalanche model, imagine that you have a pile of sand, and new sand is slowly drizzled on top the pile. At first nothing appears to be happening, but each grain of sand is interacting with adjacent grains of sand as new sands falls. There is a critical point at which the pile avalanches into a distribution large and small piles. The frequency distribution of large and small piles follow a power law distribution. A power law distribution is defined as FREQ[X] = aXb, where X is the variable of interest (pile size), a is a scaling parameter, and b is a shape parameter. Two examples of power law distributions are shown in the diagram. Note the different shapes that are produced when b is negative compared to when b is positive. When b becomes more severely negative, the long tail of the distribution drops more sharply to the X axis. All the selforganizing phenomena of interest contain negative values of b. The b is the fractal dimension for the process that presumably produced them. The widespread nature of the 1/f/span> relationships led to the interpretation of fractal dimensions between 1.0 and 2.0 as being the range of selforganized criticality. An easy way to determine the fractal structure of a selforganized process is to take the log of the frequency and plot it against the log of the object size. Then calculate a correlation between the two logs. The regression coefficient is the slope of the line, which is negative. The absolute value of the slope is the fractal dimension. The multiple basin concept of selforganization also builds on a biological niche metaphor and attempts to explain how biological species could cross a species barrier. Imagine there are several basins, each containing a population of some sort. The populations stay in their niches while they interact, change, and do whatever else they do. But the niches are connected, so that once enough entropy builds up within a basin, a few of the members bounce out into the adjacent niche. Multiple basin dynamics can also be found in economics where, for instance, product designs and product prices combine to meet distinct market needs. Sometimes, however, a product producer will jump into another basin. It is an open question as to how similar the process of jumping basins is to jumping fitness peaks in the NK model. Arguably, the multiple basin scenario is a continuation of the NK story. 
Entropy


Entropy has been mentioned in conjunction with self
organizing processes, but without definition until now. The
construct has undergone some important developments
since it was introduced in the late 19th century. In its first
incarnation it meant heat loss. This definition gave us the
principle that systems will eventually dissipate heat and
expire from "heat death." This generalization turned out to be
incorrect for a century later. When statistical physics gelled
in the early 20th century, entropy concerned the prediction
of the location of molecules in motion under conditions of
heat and pressure. It was not possible to target individual
molecules, but it was possible to create metrics for the
average motion of the molecules. This perspective
eventually led to the third incarnation, which was Shannon's entropy and
information functions in the late 1940s.
The Shannon metrics are probably the most widely used versions of entropy today, either directly or as a basis for the derivation of further entropy metrics. Imagine that a system can take on any of a number of discrete states over time. It takes information to predict those states, and any variability for which information is not available to predict is considered entropy. Entropy and information add up to HMAX, maximum information, which occurs when the states of a system all have equal probabilities of occurrence. The nonlinear dynamical systems perspective on entropy, which is credited to Ilya Prigogine, however, is that entropy is generated by a system as it changes behavior over time, and thus it has become commonplace to treat information and entropy as the same thing and designate them with the same formula: Hs = [p log2(1/p)], where p is the probability associated with an observation belonging to one category in a set of categories; the summation is over the set of categories. Some authors, however, continue to distinguish the constructs of information and entropy as they were originally intended. Other measures of entropy have been developed for different types of NDS problems, however. A short list includes topological entropy, KolmogorovSinai entropy, mutual entropy, approximate entropy, and KullbackLeibler entropy and an associated statistic for the correspondence between a model and the data. To return to selforganizing phenomena, selforganization occurs when the new structure provides a reduction in entropy associated with the possible alternative states of the system. In other words the system picks a state that it likes best, so to speak. The construct of minimum entropy, introduced by S. Lee Hong, or free energy, introduced by Karl Friston, reflect a system's proclivity to adopt a neurological, cognitive, or behavioral strategy that minimizes the number of degrees of freedom required to make a maximally adaptive response. A related principle is the performancevariability paradox. There is a tendency to think of skilled performance (sports, music, carpentry) as actions produced exactly the same way each time they are produced. There are small amounts of variability, nonetheless, that arise from the numerous neurological and cognitive degrees of freedom that go into producing the action. You can prove the point to yourself by signing your name six times on a piece of paper. Is each signature exactly like the others? It is these degrees of freedom that make an adaptive response and new levels of performance possible. The complexity range of selforganized criticality reflects a (living) system's balance between being complex enough to adapt effectively and minimizing the number of free movements necessary to do so. Unhealthy systems tend to be overly rigid. Overly complex systems and behavioral repertoires tend to waste energy, which could be detrimental in other ways. 
Online Guide for Newcomers to Agentbased Modeling in the Social Sciences Robert Axelrod (University of Michigan) & Leigh Tesfatsion (Iowa State University): The purpose of this online guide is to suggest a short list of introductory readings and supporting materials to help readers become acquainted with Agentbased Modeling (ABM).
Sugarscape This is a simulated society developed by the Brookings Institution. It depicts agents interacting in their quest for sugar, and features cellular automata structures. See what happens when they can trade commodities, breed, and spread diseases.
SWARM Agentbased Modeling System  Sante Fe Institute explains how the SWARM simulation system can be used to describe the selforganizing behavior of heatbugs, moustrap fission, and a small market with one commodity. Contains a portal to advanced materials for SWARM program users.
The Boids by Craig Reynolds. A simulation of a flock of birds developed by Craig Reynolds illustrates how a flock sticks together on the basis of only three rules. Other items on this site show similar properties for a school of fish, and reactions to predators or intruders. More swarms. More videos.
Santa Fe Institute's Complexity Explorer  Online courses about tools used by scientists in many disciplies.
Evolving Cellular Automata Santa Fe Institute explains cellular automata as computational devices and system simulations for determining the results of self organizing processes.
Emergence and complexity  Lecture by Robert Sapolsky [video]. He details how a small difference at one place in nature can have a huge effect on a system as time goes on. He calls this idea fractal magnification and applies it to many different systems that exist throughout nature.
AgentBased Models


One of the problems that made the idea of complexity famous was that if many agents within a system are interacting simul taneously, it is impossible to calculate the outcomes of each of them individually and predict further outcomes for other agents with which they interact. Calculating the possible orders in which they could possibly interact would be a daunting task by itself. What is possible, however, is to put the agents into a system and allow them to interact according to specific rules. We can also specify different rules for different agents, in which case we have heterogeneous agents. After the simulation has run long enough, the patterns of interaction stabilize into a selforganized system. The figure from Bankes and Lempert (2004) shows distribution of four types of entities that emerged after a period of time in which their agents interacted.
Agentbased models are part of a family of computational systems that illustrate selforganization dynamics such as cellular automata, genetic algorithms, and spinglass models. Briefly, cellular automata are agentbased models that are organized on a grid. One cell affects the action of adjacent cells according to some specified rule. The example shown here is very elementary, but it conveys the core idea. The rule structures are chosen by the researchers within the context of a particular problem. The most extensive work in this area is credited to Stephen Wolfram and his New Kind of Science. Genetic algorithms were first developed to model real genetic and evolutionary processes without having to wait thousands of years to see results. An organism is defined as a string of numbers that represent its genetic code. Organisms then interact in a completely random fashion (or according to other rules specified by the researcher) and "breed." Mutation rules can also be coded into the system. New organisms are then tagged with a fitness index that defines their viability for survival. Ultimately we can see what happens to the computational species relatively soon. Genetic algorithms have also found a home in industrial design. For instance one can take two or more versions of an object, e.g. an automotive design, characterize them as a string of numbers, and let them breed. The results can be filtered for functionality and usability, and aesthetic properties. The winning possibilities might find their way into realworld production. Spinglass models formed the basis of NK or Rugged Landscape models of selforganizing behavior. In principle some of the agents have common properties, and other agents have different common properties. The properties can be complex and defined and mixed up in any theoretically important way. After a certain amount of "spinning" together in a closed system, they aggregate into relatively homogeneous subgroups. To learn more about agentbased modeling and to see some examples in action, please visit some of the links included here. The Sugarscape model for artificial societies that was developed by economists at the Brookings Institute is particularly comprehensive for its logical development that closely parallels a realworld economy as rules of interaction are sequentially introduced. 
Emergence


The common use of the word has proliferated in recent years,
but it has a specific, technical origin. Psychologists remember
the maxim from Gestalt psychology, "The whole is greater than
the sum of its parts." The idea originated in scientific venues a
decade earlier, however, with the sociologist Durkheim, who was
trying to conceptualize the appropriate topics for a scientific study
of sociology. The central concern was that sociology needed to
study phenomena that could not be reduced to the psychology of
individuals. The essential solution went as follows: The process starts
with individuals who interact, do business, and so on. After enough interactions, patterns take hold that become institutionalized or
become institutions as we regularly think about them. When the
institution forms, it has a topdown effect on the individuals such
that any new individuals entering the system naturally conform
to the demands, and behavioral patterns, which are hopefully adaptive, of the overarching
system.
Emergence comes in two forms, light and strong. In the light version, the overarching structure forms but does not have a visible topdown effect. In the strong situations, there is a visible topdown effect. The dynamics of emergence were captured in some laboratory experiments by Karl Weick in the early 1970s on the topic of "experimental cultures." Groups of 3 human subjects were recruited for a group task. They worked together until they mastered their routine. Then, one by one, the members of the groups were replaced by a new person. The replacement continued until all personnel were changed. At the end of 11 generations, the newest groups followed the same work patterns as the original group, even though the originators were no longer part of the system. Two types of emergence are often observed in live social systems. One is the phase shift dynamic. The second is the avalanche dynamic that produces 1/fb relationships. Physical boundaries have an impact on the emergence of phenomena as well. Neuroscientists are also investigating the extent to which bottom up and topdown dynamics from brain circuits and localization areas are combining to produce what is commonly interpreted as "consciousness." 
Synchronization of five metronomes [video]  A reenactment of the phenomenon discovered by Christiaan Huygens which got the whole story of synchronization started. Note: This video automatically links to other excellent examples of Sync.
Interpersonal Synchronization A special issue of NDPLS (April, 2016) examined a fastmoving research area about how body movements, autonomic arousal, and EEGs synchronize between dyads, such as therapyclient dyads, and larger work teams, and the effect synchronization has on various outcomes. See contents. Special order this issue
SyncCalc 1.0 by Anthony F. Peressini & Stephen J. Guastello calculates a coefficient of synchronization from several behavioral or physiological time series that characterizes the global system. Prototyped for human group dynamics, the algorithm identifies drivers and empaths within the group. Be sure to read the instructions before downloading the program, which is available in PC and MAC formats. The two test data sets are .txt files.
Synchronization


The first example of synchronization in mechanical systems was
reported in 1665 by Christiaan Huygens, who noticed that two
clocks that were ticking on their own cycles eventually ticked in
unison. The communication between clocks occurred because
vibrations were transferred between them through a wooden
shelf. Another prototype illustration is synchronization of a
particular species of fireflies, as told by Steven Strogatz: In the
early part of the evening the flies flash on and off, which is their
means of communicating with each other, which they do at their
own rates. As they start to interact, they pulse on and off in
synchrony so that the whole forest lights up and turns off as if one were flipping a light switch.
William Strutt opened investigations into the structure of sound waves in 1879, including those that appear synchronized. He observed that two organ pipes generating the same pitch and timbre would negate each other's sound if they were placed too close together. Thus two oscillators could exhibit an inverse synchronization relationship that he called oscillation quelching. Based on the following century of advancements in the study of oscillating phenomena, Pikovsky et al. defined synchronization as "an adjustment of the rhythms of oscillating objects due to their weak interaction" (Synchronization: A universal concept in nonlinear sciences, 2001, p. 8). The oscillators must be independent, however; each one must be able to continue oscillating on its own when the others in the system are absent. Strogatz (Sync: The emerging science of spontaneous order, 2003) concisely described the minimum requirements for synchronization as two coupled oscillators, a feedback loop between them, and a control parameter that speeds up the oscillating process. When the control parameter speeds the oscillating process fast enough, the system exhibits phase lock. Autonomic arousal levels (galvanic skin response) for four emergency response team members working against an attacker (GSR 5).
In phase lock, the contributing oscillations all start and end at the same time, with start and end times varying only over a small and rigidly bounded range. If we imagine that the time series of observations produced by a pure oscillator is a sine wave and that its phasespace diagram is a circle, the positions of two or more synchronized oscillators are clustered together as they move around the circle at the same time. Phase synchronization is actually a matter of degree that depends on other matters of degree, such as the tightness or looseness of the coupling produced by the feedback, whether the feedback is unidirectional or bidirectional (or omnidirectional in the case of systems of multiple oscillators), and whether delays in feedback are prominent. The oscillators in a system are not restricted to pure forms; they can be forced, aperiodic, or chaotic processes. In fact, three coupled oscillators are sufficient to produce chaos. This principle has been exploited as a means for decomposing a potentially chaotic time series into its contributing oscillatory components. Chaos can also be controlled by imposing a strong oscillator on the system. Nervous systems are composed of many oscillating and chaotic subassemblies; some activate each other while others are inhibitory. Thus one would anticipate that the products of the nervous system  movements, autonomic arousal, speech and cognition patterns  are also fundamentally chaotic, and that pure oscillators are more often the exception than the rule. The journal Nonlinear Dynamics, Psychology and Life Sciences published a special issue on synchronization (April, 2016) that spanned synchronization within dyadic relationships, relationships that encompassed teams of four or six people, and finally the Nagent case (Sulis). The researchers asked questions such as who synchronizes to whom, in what way, and to what extent? What conditions affect the synchronization of movements, autonomic arousal, speech patterns, and brain waves? Principles of synchronization also lead to some pragmatic questions: How does synchronization promote more successful therapy sessions and more effective work teams? Are there conditions where synchronization is not in the best interest of the dyad or team? If synchronization, which often occurs at a nonverbal level of communication, contributes to desirable decisions and actions at a more explicit level, it can also facilitate negative emotions and irrationality, particularly if stressful conditions are involved. 
"An Introduction to Graph Theory and Complex Networks" by Maarten van Steen (2010; 287p., 6MB).
More about network structures and network analysis, by Matthew Denny, Institute for Social Science Research, University of Massachusetts, Amherst. [PDF]
Networks


The idea of social networks was introduced by social psychologists
and sociologists in the early 1950s. Its underlying math comes from
graph theory. In the example diagram, the circles represent people,
and the arrows represent paths of communication, which can be
oneway or twoway. Network graphs are indifferent to the content
of the communication. People interact with each other about all
sorts of things  work, family and other social activities, common
interests, etc. In fact people interact about multiple common interests, so that one graph structure can be superimposed on
another.
More generally, the circles do not need to be people at all. They can also be airports or other centers in a transportation network, exchange points in a telephone system, or preypredator relationships within an ecological food web. The circles can also represent ideas that come up frequently in conversations and become connected to other ideas. Criminologists use network concepts to figure out who is doing naughty things with whom. Marketing analysts use them to figure out who is talking about their products and to figure out what other products that people might like also. Ecologists use the same constructs to assess the robustness and fragility of an ecosystem when one of its contributing species is undergoing a sharp population decline, perhaps due to human intervention. Networks can also be analyzed to determine the patterns of communication that are needed to identify efficient and nonefficient alternative configurations. For instance the star pattern of five people contains a central hub that communicates with each of the other four nodes, often bilaterally. The pentagon configuration, in contrast, depicts five nodes that are communicating with all the other nodes simultaneously, as in a group discussion. One type of metric that can be applied to the analysis of networks is centrality. There are three commonly used types of centrality: degree, betweenness, and closeness. Degree is the total number of links that a node can have relative to the total number of links in the network. Betweenness is the extent to which a node gets in between any two other connections. Closeness is the extent to which one node connects to another with the smallest number of links in between. Closeness is actually the inverse of degree, and people often like to discuss how many degrees of separation exist between themselves and somebody else (who might be famous). As one might surmise, a node can become more central if it has more links to the other entities in the network. If one were to assess the frequency distribution of links associated with nodes within a network, the numbers of links are distributed as a 1/fb power law function, with a small number of nodes having many links and many nodes having much fewer links. The 1/fb nodes with the most links become known as hubs in practical application. The pattern strongly suggests (but does not necessarily prove by itself) that the network is a result of a selforganizing process. Studies of network structures, primarily due to Albert Barabasi, Duncan Watts, and Steven Strogatz, uncovered some interesting and useful properties of random, egalitarian, and smallworld networks. A random network is just what its name implies: A group of potential nodes is connected on a random basis. An egalitarian network is one in which each node communicates to its two next door neighbors, but no further. If we were to drop a random connection into either type of network, the average number of degrees between any two nodes drops sharply. Hubs start to form, and we end up with a smallworld network in which the average number of degrees between nodes is approximately 6. Thus, in a small world, anyone can reach, or be connected to, anyone else in six links or less; the challenge, however, is to figure out which six links will do the job. The robustness of system architectures has numerous practical implications. If a small world is subject to a random attack, meaning that the attack is against one node selected at random, the network will survive because there are enough communication pathways to link the remaining nodes to each other. If a hub is attacked, the survival of the network could be in big trouble. The foregoing dynamics depict how a network could selforganize into a 1/fb distribution of connections that produce hubs. Hubs become attractors in the sense that they attract more connections: people move to cities, airlines organize their routes around hub airports, and so on. The avalanche dynamic looms in the background, however: Physical systems have a limit to their carrying capacity. Cities become congested and polluted and airports struggle to maintain flight schedules and proper air traffic control. One can probably think of more examples. When the carrying capacity is reached, it becomes advantageous to move out of the city, find a new airport to grow, or adapt one's occupation to one that has less competition for resources and attention. The big hub breaks into smaller units that are more equal in size. Per Bak showed, however, that the avalanche produces smaller sand piles that are distributed 1/fb in size. Thus the process is likely to repeat in some fashion. So far we have focused on the nature of the nodes, but what about the connections? The distinction between strong versus weak ties that has some important dynamical implications. In human communication, strong ties mean rapid dissemination of information within the network. As a result there is a rapid uptake of ideas, which can be convenient many times. The limitation is that the importation of new information becomes unlikely. In those situations, weak ties with other nodes offer the benefit of reaching out to many more nodes, albeit less often, to collect new informational elements. In a food chain, a predatorprey relationship in which the predator only eats one or a very few specific prey is a strong tie. If an ecological disaster compromises the prey population, the predator is in similar trouble. If the predator has more omnivorous tastes, and thus has weak ties to any one particular food source, the predator can leverage itself against a loss of a tasty favorite and survive. 
Nonlinear Dynamics, Psychology, and Life Sciences is the refereed research journal of the Society for Chaos Theory in Psychology & Life Sciences. Since its inception in 1997, NDPLS is the only refereed research journal that is uniquely devoted to this range of nonlinear applications and related methodologies. See the journal's home page for contents, data base indexing, citation, editorial, and related information.
This special issue of Nonlinear Dynamics, Psychology, and Life Sciences (January, 2007) was devoted to the paradigm question as it was manifest in a variety of disciplinary areas. See contents. Inquire about availability.
The Impact of Edward Lorenz. Special issue of NDPLS (July, 2009) pays a historical tribute to Lorenz discovery of the butterfly effect, its mathematical history, later developments, and its applications in economics, psychology, ecology, and elsewhere. See contents. Special order this issue.
The Nonlinear Dynamical Bookshelf is a regular feature of the SCTPLS Newsletter (sent to active members) that presents announcements and brief summaries of new books on topics related to nonlinear dynamics. Contents are limited to information we can collect from book publishers or that crawl into our hands by any other means.
Open access book reviews: In an effort to help the world get caught up on its reading, NDPLS has made its book reviews published since 2004 free access on its web site. Browse the journal's contents to see the possibilities.
Books written by members of the Society for Chaos Theory in Psychology & Life Sciences. This list is as complete as we can get it for now, and it is updated regularly. Most are technical in nature. Some of these works go beyond the scope of nonlinear science. Some are whimsical. All are recommended reads.
Recent books by members is a sublist of the above that lists only those books published with in the past four years.
Applications  The Paradigm


There are many applications of nonlinear dynamics in psychology, biomedical sciences, sociology, political science, organizational behavior and management, macro and microeconomics. We can only provide an overview here and direct our readers to more resources using the links on the panel to the left.
So let's start with the big picture  the paradigm. Nonlinear theory introduces new concepts to psychology for understanding change, new questions that can be asked, and offers new explanations for phenomena. It would be correct to call chaos and complexity theory in psychology a new paradigm in scientific thought generally, and psychological thought specifically. A special issue of Nonlinear Dynamics, Psychology, and Life Sciences in January, 2007 was devoted to the paradigm question, which actually spans across the various disciplines we study. The highlights of the paradigm are: 1. Events that are apparently random can actually be produced by simple deterministic functions; the challenge is to find the functions. 2. The analysis of variability is at least as important as the analysis of means, which pervades the linear paradigm. 3. There are many types of change that systems can produce, not just one; hence we have all the different modeling concepts that have been described thus far. 4. Contrary to common belief, many types of systems are not simply resting in equilibrium unless perturbed by a force outside the system; rather, stabilities, instabilities, and other change dynamics are produced by the system as it behaves "normally." 5. Many problems that we would like to solve cannot be traced to single underlying causes; rather, they are product of complex system behaviors. 6. Because of the above, we can ask many new types of research questions and need to develop appropriate research methods for answering those questions. Such efforts are well underway (see further along on this Resources page). Nonlinear science is an interdisciplinary adventure. Its growth has been facilitated by the interactions among scientific disciplines, as they are traditionally defined. Scientists soon discover that there are common principles the underlie phenomena that are seemingly unrelated. Consider some quick and blatant examples: 1. The phase shifts that are associated with water turning to ice or vapor follow the same dynamical principles as the transformations made by clinical psychology patients from the time of starting therapy to the time when the benefits of therapy are realized in their lives. 2. The changes in work performance (or error rates) as a person's mental workload becomes too great follows the same dynamics as the buckling of a beam, the materials for which could range from elastic and flexible to rigid and stiff. 3. The growth of a discussion group on the internet parallels that of a population of organisms, which is limited by its birth rate and environmental carrying capacity. 4. The transformation of a work team from a leaderless group into one with primary and secondary leadership roles as its task unfolds bears a close resemblance to the process of speciation in Kauffman's NK[C] model as an organism finds new ecological niches in a rugged landscape. (The former is a less complex version of the latter, however.) 
The most recent perspective in psychology generally might be termed 'the biopsychosocial answer to everything.' Researchers are looking for patterns and connections between physiological activity (patterns in EEGs or autonomic arousal), cognition, and obvious behaviors. Emotions and the environment affect all three major domains. The opportunities for nonlinear dynamics are abundant.
Research Example 1: Average learning rate as a function of the Lyapunov exponent showing that weak chaos (positive ) is beneficial for learning in this artificial neural network. From Sprott, J. C. (2013). Is chaos good for learning? NDPLS, 17(2), 223232.
Research Example 2: Time series for task selection and performance for one participant in a multitasking study who used the 'favorite task' strategy. From Guastello et al. (2013). The minimum entropy principle and task performance. NDPLS, 17(3), 405424.
Research Example 3: Relative frequency of critical instability periods during psychotherapy. Two phases can be identified where the relative frequencies of critical stabilities increases above 40%, which occur at the beginning of the therapy and in the phase before exposureresponse prevention (ERP). From Heinzel, S., Tominschek, I., & Schiepek, G. (2014). Dynamic patterns in psychotherapy: Discontinuous changes and critical instabilities during the treatment of obsessive compulsive disorder. NDPLS, 18(2), 155176. 
Chaos and Complexity in Psychology: The Theory of Nonlinear Dynamical Systems edited by Guastello, Koopmans, & Pincus (2009). This collection captures the state of the science of nonlinear psychology in application areas ranging from neuroscience to organizational behavior. For further description and ordering information see Cambridge University Press.
Article: "Chaos as a Psychological Construct: Historical Roots, Principal Findings, and Current Growth Directions" by S. J. Guastello
Chaos, Complexity, and Creative Behavior. Special issue of NDPLS (April, 2011) explores nonlinear dynamics of the cognitive, process, product, and diffusion aspects of creative behavior. See contents. Inquire about availability.
Developmental Psychopathology. Special issue of NDPLS (July, 2012) examines parentchild interactions from a dynamical point of view. See Contents. Inquire about availability.
Interpersonal Synchronization. Special issue of NDPLS (April, 2016) examines a fastmoving research area about how body movements, autonomic arousal, and EEGs synchronize between dyads, such as therapyclient dyads, and larger work teams, and the effect synchronization has on various outcomes. See contents. Special order this issue.
Article: "Nonlinear Dynamics in Psychology" by S. J. Guastello. This open access article from Discrete Dynamics in Nature and Society, vol. 6, pp. 1129, 2001 gives an overview of applications in psychology, except neuroscience, as they existed through early 2000.
Applications  Psychology


Psychology has been transforming rapidly with the nonlinear influence. Applications of NDS in psychology include neuroscience; psychophysics, sensation, perception and cognition; motivation and emotion, group dynamics, leadership, and collective intelligence; developmental, abnormal psychology and psychotherapy; and organizational behavior and social networks. The Society's book project, Chaos and Complexity in Psychology: The Theory of Nonlinear Dynamical Systems provides a stateofthescience compendium (through 2008) of psychological research on the foregoing topics in textbook format. The chapter authors make frequent contrasts between the conventional scientific paradigm and the nonlinear paradigm.
The article that follows in the list of links, "Chaos as a Psychological Construct" examines the concept of chaos as it has appeared in a wide range of psychological literature. Uses of the construct range from common use of the word chaos, which usually has no intended reference to formal nonlinear dynamics, to applications where chaos is meant seriously. The research efforts that follow on this page, in psychology and elsewhere, use NDS constructs literally and analytically. The resources list for psychology includes special issues of Nonlinear Dynamics, Psychology, and Life Sciences that are focused on psychomotor coordination and control, creativity, brain connectivity, developmental psychopathology, organizational behavior, and education, and interpersonal synchronization. Other special issues are in the works, and announcements of new projects will appear on our NEWS page and the NDPLS home page. To make matters more interesting, many areas of psychology have embarked on the "biopsychosocial explanation of everything." There is a growing awareness of the interconnections among brain and nervous system activity, cognitive processes and social processes now that we are learning much more about all three realms. The opportunities for new works  and stronger explanations for phenomena  in nonlinear dynamics are extensive. Consider what else is going in the biomedical sciences (next). 
Optimum Variability. Special issue of NDPLS (October, 2015) examines the relationship system complexity and the health, functionality, and adaptability of biomedical systems, individual wellbeing, and work group dynamics. See contents. Special order this issue.
Medical Practice. Special issue of NDPLS (October, 2010) offers theoretical and empirical studies that indicate that a paradigm shift in neurology, cardiology, rehabilitation, and other areas of medical practice is very necessary. See contents. Special order this issue.
Brain Dynamics. Special issue of NDPLS (January, 2012) explores developments in brain connectivity and networks as seen through temporal dynamics. See contents. Special order this issue.
Neurodynamics: Special issue of NDPLS in honor of Walter J. Freeman III. Contributing authors extend Freeman’s progressive thinking to new frontiers. See contents. Editorial introduction. Special order this issue.
Psychomotor Coordination and Control. Special issue of NDPLS (Jan. 2009) explores developments in psychomotor learning and skill acquisition and applications to rehabilitation. See contents. Special order this issue.
Handbook on Complexity in Health, edited by J. P. Sturmberg & C. M. Martin (2013) offers over 1000 pages of viewpoints and research on medical thinking and practice, behavioral medicine and psychiatry from the perspective of nonlinear dynamics and complex systems. See table of contents.
Applications  Biomedical Sciences


Some of the first applications in the biomedical sciences explored the comparisons of the fractal dimensions of healthy and unhealthy hearts, lungs, and other organs. Larger dimensions, which indicate greater complexity, were observed for the healthy specimens. This finding gave rise to the concept of a complex adaptive system in other living and social systems. In the area of cognitive neuroscience, memory is now viewed as a distributed process that involves many relatively small groupings of neurons, and that the temporal patterns of neuron firing contain a substantial amount of information about memory storage processing. The temporal dynamics of memory experiments can elucidate how the response to one experimental trial would impact on subsequent responses and provide information on the cue encoding, retrieval, and decision processes. One might examine behavioral response times and rates, the transfer of local electroencephalogram (EEG) field potentials, similar local transfers in functional magnetic resonance images. In light of the complex relationships that must exist in processes that are driven by both bottomup and topdown dynamics, the mesolevel neuronal circuitry has become a new focus of attention from the perspective of nonlinear dynamics. Dynamical diseases, which were first identified by Leon Glass, are those in which the symptoms come and go on an irregular basis. As such, the underlying disorder can be difficult to identify and the symptoms can be difficult to control unless one reframes the problem as one arising from the behavior of a complex adaptive system. This notion has now carried over to the analysis of psychopathologies with some success. There are, in turn, further implications for medical practice, David Katerndahl and other writers have observed that the mainstay of medical practice in most countries still revolves around the single cause mentality. 
Research Example 4: A sample EMG time series and corresponding recurrence plot for one participant during a single experimental trial of a vertical jump task. From Kiefer, A. W., & Myer, G. D. (2015). Training the antifragile athlete: A preliminary analysis of neuromuscular training effects on muscle activation dynamics. NDPLS, 19(4), 489510.
Research Example 5: The shape of the T cells nuclei (transmission electron microscopy of the skin, x 15000) is more complex in the tumor (right) in comparison to flogosis (chronic dermatitis, left). From Bianciardi, G. (2015). Differential diagnosis: Shape and function, fractal tools in the pathology lab. NDPLS, 19(4), 437464. 
Nonlinear Organizational Dynamics. Special issue of NDPLS (January, 2013) presents empirical studies on individual work performance, group dynamics, organizational behavior. See Contents. Special order this issue.
Article: "A Complex Adaptive Systems Model of Organizational Change," by K. J. Dooley.
Article: "Nonlinear dynamical systems for theory and research in ergonomics," by S. J. Guastello. Ergonomics, 2017, 60, 167193. Request reprint from author.
Advanced Modeling Methods for Studying Individual Differences and Dynamics in Organizations. In this special issue of NDPLS, authors consider the possible uses of growth curve modeling, agentbased modeling, cluster analysis, and other techniques to explore nonlinear dynamics in organizations. See Contents. Editorial introduction. Special order this issue.
Applications  Organizational Behavior


Organizational Behavior grew up from a combination of influences, most of which stem from Industrial/Organizational Psychology, although there are important influences from other areas of psychology, sociology, cultural anthropology, contemporary management, and economics. In short, it is the study of people at work. The subject area had undergone roughly five paradigm shifts over the last century while trying to answer just one question, "What is an organization?" 1. During the rise of large corporations in the late 19th century there was no answer. Business organizations were managed on an ad hoc basis, which is to say the opportunities for chaos and confusion in the conventional sense abounded and intuition prevailed. Organizational leaders had few role models other than the military and the Catholic Church, both of which were commandandcontrol structures then and not much different now. 2. Weber, a sociologist introduced the concept of bureaucracy circa 1915, which was intended to instill rationality and efficiency where there was none before. People were separate from their roles. It was the roles that had rights and responsibilities. The drive toward impersonality and supposed efficiency had a negative consequence, which was to produce impersonal and mechanistic enterprises with people being plug and play machine parts. 3. The nature of organizations changed drastically with the introduction of humanistic psychology, which extended not only to the understanding of individual personality, but the role of people in organizations. The full capabilities of an organization could be unleashed by giving the normal human tendencies to grow and achieve new opportunities for expression. Here entered psychologist Kurt Lewin, whose platform work on organizational change (a.k.a. organizational development) facilitated the first understanding of social change and intervention processes. Most of the early change efforts were directed at changing an organization from a mechanistic and authoritarian bureaucracy to an enterprise that was consistent with human nature. 4. The transition to the organic model was not as dramatic as the previous change in viewpoints. The new understand was, nonetheless, that the organization itself is a living entity, and not simply humans in a nonliving shell. Organizational life bore many similarities to the biological life of single organisms. The organic model was an important step along the way to what came next. 5. The current paradigm, and answer to the question, "What is an organization" is: A complex adaptive system. Here we can observe all the principles of nonlinear dynamics  chaos, catastrophe, selforganization and more  occurring in relationships between people and their work, the functionalities of work groups, work group dynamics, the relationship between the organization and its environment and organizational change. This line of thinking has broad implications for leadership before, during, and after an organizational change process. In fact, change is now understood to be ongoing and business as usual, and not confined to deliberate interventions. Deliberate interventions are often necessary none the less. The new paradigm is explicated in "A Complex Adaptive Systems Model of Organizational Change," by K. J. Dooley. The article debuted in the inaugural issue of NDPLS in 1997, and remains a landmark in our new understanding of organizational behavior. Organizational behavior, or I/O Psychology, was among the first application areas of NDS in psychology, with the first contributions dating to the early 1980s. Extensive work on organizational theory has followed since then. Human factors (engineering) started as the psychology of personmachine interaction  everything that took place at the interface between person and machine. There was also some concern with the interface between the person and the immediate physical environment. The psychological part of the subject matter is primarily cognitive in nature. The area has merged in scope with ergonomics, which started with interaction between people and their physical environment and numerous tpoics in biomechanics. In light of new technological transitions and the growth in connected networks of people and machines, human factors and ergonomics have expanded further to include group dynamics regularly, and organizationwide behavior in some of the most recent efforts. Of particular importance here, there is now a further recognition of systems changing over time and the nonlinear dynamics involved, such that it is now possible to define NDS as a paradigm of human factors and ergonomics. Applications of particular interest include nonlinear psychophysics where the stimulus source and observer are in motion, control theory, cognitive workload and fatigue, biomechanics connected to possible back injuries, occupational accidents, resilience engineering, and work team coordination and synchronization. 
Research Example 6: Line chart of work motivation fluctuations across different scales: work tasks and subtasks for one participant. From Navarro, J. et al. (2013). Fluctuations in work motivation: Tasks do not matter! NDPLS, 17(1), 322.
Research Example 7: Cooperating units form capabilities. Multiagents that cooperate through leadership influence converge toward attractors. Agent to agent influence is based on perceived 'reputation' while competition to connect to the most centralized agents consolidates influence in 'leader roles' shown in gray. From Hazy, J. (2008). Toward a theory of leadership in complex systems: Computation modeling explorations. NDPLS, 12(3), 281310.
Research Example 8: Cusp catastrophe models for cognitive workload and fatigue. Both processes are thought to be operating simultaneously during task performance. From Guastello, S. J., et al. (2013). Cusp catastrophe models for cognitive workload and fatigue: A comparison of seven task types. NDPLS, 17(1), 2348. 
Complexity in economics edited by J. B. Rosser, Jr. The international library of critical writings in economics 174. UK: Edward Elgar. This 3volume set (2004) compiles a wide range of important and fundamental works on nonlinear dynamics in all the areas of economics. Further description and ordering information.
Article: "Complexity and Behavioral Economics" by J. B. Rosser, Jr. & M. V. Rosser (2015). The works of H. Simon figure prominently in this surveyreview article.
Applications  Economics & Policy Sciences


The relationship between concepts from economics and physics, nonlinear and otherwise, dates back to the early 20th century. The Walrasian equilibrium established what is now the 'conventional' of 'classical' paradigm in economics which posits that the economy is an a natural equilibrium state (something akin to 'homeostasis'), which is most often assumed to be a fixed point, unless it is perturbed by agents or events from outside the immediate system. The study of business cycles, however, changed the view of what an 'equilibrium' could really mean, and once connections between the cycles were established, it became clear that chaos was possible. Variations in system behavior (e.g., securities prices, unemployment, inflation) could no longer be attributed to influences from outside; they needed to be interpreted as the natural dynamics of the system and that the natural or intrinsic dynamics could generate much more than fixed points. For more about the contrast between the classical and nonlinear paradigms, please see the article by Dore and Rosser that is linked in the left column. The Nash equilibrium which evolved into game theory, is another notable example. Game theory became a key concept in psychological, economic, and other agentbased dynamics since that time. The advent of evolutionary game theory in the early 1980s particularly the work of Robert Axtell and John Maynard Smith extended the reach of nonlinear simulation studies. Evolutionarily stable states, which developed from thousands of agents playing the same game, have some connection to the equilibria formed by any two individual agents, but could be substantially different from the individuallevel equilibria. What we are actually seeing is a global structure emerging from the interactions among individual agents. Rosser's 3volume set (Menu 3) compiles the critical work in nonlinear economics that appeared in many journals through 2004. Even more has happened since then. Finance is one of four broad areas of economics that is replete with nonlinear dynamics. Macroeconomics is another challenging dynamical domain. Some schools of economic thought attempt to reduce systemlevel events to the decisions of individual financial agents. NDS studies in macroeconomics, however, are more consistent with other schools of economic thought that assume that one cannot assume a particular systemlevel outcomes, such as inflation or unemployment from knowledge of forces acting on individual economic agents. Ecology is another active area of nonlinear science. The discovery of the logistic map function actually arose in the context of population dynamics, and birth rates and environmental carrying capability change. Ecological economics is a third broad area that lends itself to NDS analysis. Topics in this group include environmental resource protection and utilization, agricultural management, and land use and the fractal growth of urban areas. Cellular automata have been useful tools for studying urban expansion, as one example. Evolutionary economics is the study of behavior change on the part of microeconomic agents, institutions, or macroeconomic structures. Here one finds chaos and elementary dynamics, gametheoretical experiments with evolutionary stable states, and multiagent simulations based on genetic algorithms or other computational strategies grounded in NDS theory. An important part of policy making in any of these area is the ability of the decision makers to recognize the "time signatures" of various dynamical processes and plan accordingly. The efficacy of the current wave of institutional policymakers for doing is an open question. In fact, realworld events often involve dynamics that occur on several temporal time horizons. In the case of response to natural disasters for instance, there is longterm planning for the possibilities, shorterterm response when an earthquake or tsunami actually happens, and responses that occur in the scale of minutes and seconds when people need to act in the moment to save a life. We recommend the article on time ecologies by Gus Koehler, which appears in the list of links. 
Research Example 9: Densities of exuberant optimists and exuberant pessimists in market activity as time unfolds. From Gomes, O. (2015). A model of animal spirits via sentiment spreading. NDPLS, 19(3), 313343. 
Applications  Ecology


Ecological applications of NDS fall into the domains of both biologists and economists. Topics of nonlinear interest most often include population dynamics, preypredator dynamics, the complex web of relationships among codependent species, and the impact of human interventions such as fish and livestock harvesting and agriculture generally.
The logistic map function, which was described above as a classic bifurcation structure, originated with population studies, and has in turn inspired numerous studies outside of ecology that involve transitions between chaotic and nonchaotic temporal patterns. Robert May is credited for landmark modeling strategies for ecological systems that involve birth rates, environmental carrying capacity, and other intervening factors. 
Research Example 10: The human population of Easter Island is graphed for f (decrease in the growth rate of trees) ranging from .0004 to .001. For small values of f the population oscillates around the coexistence equilibrium, and for larger values of f the human population is unstable and crashes. These diagrams illustrate that the stability of the coexistence equilibrium in the Invasive Species Model is sensitive to the parameter modeling the effect of the rats on the island's ecosystem. From Baesner, W. et al. (2008). Rat instigated human population collapse on Easter Island. NDPLS, 12(3), 227240.
Research Example 11: Dependence of the averaged plant biomass as a function of insect production rates; O = oscillations, * = chaos. Simulation parameters roughly correspond to the length of a normal growing season. From Medvinsky, A. (2009). Chaos and predictability in population dynamics. NDPLS, 13(3), 311326. 
Nonlinear Dynamics in Education. Special issue of NDPLS (January, 2014) examines parentchild interactions from a dynamical point of view. See Contents. Special order this issue.
Applications  Education


Applications in education cover a range of individuallevel, grouplevel, and institutional level topics. Examples include student learning and motivation dynamics, social dynamics in the classroom or school, studentteacher interactions, career development, absenteeism, and the longrun effect of policy concepts on the success of metropolitan school systems. There is some parallel between the topics addressed as education issues and those in organizational behavior more generally.

Research Example 12: A state space describing the dimensions 'help given by the teacher' and 'number of math problems solved during one lesson by the student,' together forming a dynamic system. During the first lesson the student is given much help and solves only a few problems. Eventually the system settles into an attractor state. From Steenbeek, H., & van Geert, P. (2013). The emergence of learningteaching trajectories in education: A complex dynamic systems approach. NDPLS, 17(2), 233268. 
Nonlinear Dynamical Systems Analysis for the Behavioral Sciences Using Real Data, edited by Stephen J. Guastello and Robert A. M. Gregson (2011). Book covers a wide range of traditional and statistically based techniques for nonlinear analysis, examples, experimental design tips, and software operation. See description.
Tutorials in Contemporary Nonlinear Methods for the Behavioral Sciences, edited by M. A. Riley & G. C. Van Orden (2005). A Digital Publication.
TISEAN Nonlinear Time Series Analysis Routines by H. Kanz & T. Schreiber. This widely used program computes correlation dimensions and other traditional metrics from real data after applying a nonlinear filering routime for error variance. Free donwload, written in C).
Time Series Data Sources. We put together a list of resources where you can time freely available time series data in economics, physiology, etc.
An Overview of Nonlinear Methods


This section is compiled for the benefit of researchers who are considering how they might start a project and organize their data analysis. The first step is to conceptualize the formal dynamics that could apply to a problem and build a substantive theory in which psychological or other qualitative variables contribute to the dynamics. The model should be testable. Analytic strategies that have been developed to make computations that inform about the dynamics occurring in a data set include: the fractal dimension, Hurst exponent, Lyapunov exponent, BDS statistic, several measures of entropy, analyses based on polynomial regression or nonlinear regression, Markov chains, and symbolic dynamics. There are also visualization techniques such as phase space analysis, statespace grids, and recursion plots that have means for quantifying dynamics and various properties of the time series. A strong theory about the phenomenon would greatly reduce the number of models that should be tested. By the same token, there is no reason to believe that the theoretical models that originated in mathematics would be observed in their idyllic forms in real data. Noise is always a challenge. For instance, there were some early disappointments when what was thought to be chaos turned out to be noise generated by the laboratory equipment. One remedy for noise is to filter the data first, then proceed with the calculations of choice results. By 'direct calculations' we mean some computations that researchers have found meaningful early on were not statistical in nature, meaning that they assumed no further error in the data, did not rely on probability functions, and did not provide inferential tests of hypotheses. Statistical procedures for capturing the same underlying constructs were soon introduced. The strategy is that a nonlinear model, chaotic or otherwise, needs to be tested statistically and separated from residual variance. Filtering is sometimes possible as when laboratory is corrected for AC hum. Noise can be introduced, however, from all sorts of uncontrolled sources  uncontrolled events in the laboratory experiments, uncontrolled individual differences in responses to the experimental conditions, and measurement error. In the classical measurement theory that social scientists usually rely upon, the measurement error (or noise) in a static distribution of observations is independent of any other errors and independent of the underlying true score or measurement. When the measurement is observed over time, however, the error subdivides into the classic form of error, which is now called independently and identically distributed (IID) error, and dependent error. Dependent errors interact with the true scores and other errors over time. The presence of dependent error is one hallmark of a nonlinear function. The researcher then employs a statistical analyses, such as polynomial regression or nonlinear regression, evaluate the degree of fit between the model and data. The remaining variance unaccounted for is error, although it might offer some clues regarding how a modified model could be better. Note that there is an assumption here that noise and 'true measurements' are inseparable in raw form, and the goal of the analysis is to separate the two portions of variance. Transient effects are complications that occur in the dynamics themselves. When transient effects occur, the dynamics change for a period of time, and sometimes revert to the original dynamic pattern. Transients can be difficult to identify and separate from the core dynamic if the data sets are relatively short, which they often are. The advisement to researchers is to look for a rule by which the dynamics switch from one model to another, or from the core dynamic to a [generic] transient and back again. That said, we can provide an overview of the analyses that have had the largest impact. The analyses can be divided between traditional deterministicallybased procedures. The traditional methods include phase space analysis, the correlation dimension, and the Lyapunov exponent. The stochasticallybased procedures, which are often more compatible with problems in the social sciences, include statistical analysis for catastrophe models, redefinitions of the Lyapunov exponent and correlation dimension for statistical analysis, some advanced strategies for phase space analysis, and Markov Chain analysis. Recursion Quantification Analysis (RQA), state space grids, symbolic dynamics techniques, and entropy statistics fall somewhere between the two camps. 
Phase Space Analysis


A phase space diagram is a picture of a dynamical process that can tell us quite a bit about the behavior of a system that follows a particular function. It is usually drawn as a plot of the change in X (DX) at time t+1 as a function of X at time t  velocity versus position. The figures shown earlier for the fixed point, limit cycle, and Lorenz attractors are phase space diagrams. There are a couple other varieties of phase space diagram such as the return map, which is a plot of X at time t+1 (rather than DX) as a function of X at time t, and plots of two variables that are part of a more complex function that involves two order parameters. Phase space diagrams are useful tools for visualizing the dynamics inherent in a data set. They are usually supplemented with metrics such as the correlation dimension or Lyapunov exponent. It can be challenging to produce phase space diagrams for real data because they do not provide any inferential statistics by themselves, and the appearance of the diagram can be seriously affected by noise and by projecting the time series in an inadequate number of spatial dimensions. Problems of spatial projection are generally handled through analyses such as false nearest neighbors or principal components analysis. 
Phase space diagrams for two chaotic attractors: The HenonHiles (upper), and the Rossler (lower). Color is often used to capture a fourth dimension of the attractor. 
Correlation Dimension


Three descriptive metrics that are commonly applied to a time series are the correlation dimension, the Lyapunov exponent, and the Hurst exponent. The correlation dimension is a computation of a fractal dimension. The basis of the algorithm is to take the time series, treat it as a complicated line graph, and cover the graph with circles of radius r. It then counts the number of circles required, then changes the radius and repeats many times. Then it correlates the log of the number of circles required with the log of the radius. The result will be a line with a negative slope. The absolute value of the slope is the fractal dimension. Another popular calculation, involves the use of an embedding dimension, which is described in the section on fractals appearing earlier. The correlation dimension is computed first with the assumption of an embedding dimension of 1, then assuming 2 dimensions, then 3, and so on. The computed fractal dimension will increase along with the embedding dimension up to a point where it reaching an asymptote, which is the final answer. The GrassbergerProcaccia algorithm is usually used for this purpose and is included in the TISEAN and other software packages. The fractal dimension can also be rendered by statistical means, which are described in a later section of this page. As mentioned earlier (and see the various links), fractal dimensions characterize many structures of living and physical systems. They are fractional taking on values in between the integer values associated with elementary geometry. Table 1 contains some rough interpretations. Interpretation of Correlation Dimensions

Surrogate Data Analysis and Experiments


The presence of fractal structure, if it is calculated through a nonstatistical method, is usually contrasted against an alternative interpretation, which is that the fractal value for the time series could occur by chance. A statistical test of this proposition can be performed as follows: (a) Take the time series and randomly shuffle all the points. This process will preserve the overall mean and standard deviation of the time series, but will disrupt any serial dependency among the points if it exists. (b) Repeat the shuffle 10, 100, 1000 times. (c) Calculate a fractal dimension on each of the shuffled time series, and calculate the mean and standard deviation of each of the fractal dimensions that are obtained. (d) What are the odds that the fractal dimension that was obtained from a true nonlinear function and not from the distribution of values obtained from the shuffled time series? Another way to finesse the noise problem is to conduct an experiment in which something that is thought to affect the complexity of the time series is systematically varied. In an experiment, one might have separate groups of human subjects that are performing a task under different conditions, and each subject is producing a time series. Calculate the correlation dimension for each subject, then compare the groups using a ttest, analysis of variance, or similar type of analysis for an experiment. Nonparametric statistics are often preferred, however. Any distortions in the nonlinear metric that were caused by error, noise, or sampling are assumed to be equal or varying randomly across the experimental conditions, and the mean differences in metrics such as the fractal dimension, entropy, etc. are what matter. 
Lyapunov Exponent


The Lyapunov exponent evaluates the relative amount of expansion and contraction between successive pairs of points in a time series. It is perhaps best interpreted as a measure of turbulence in a physical process or time series data. As mentioned previously, it is actually a spectrum of values (when calculated through the direct, or nonstatistical method). If the largest value is a positive number, the series is chaotic. If the largest value is negative, the series is contracting to a fixed point. Values of 0 indicate either a straight line or a perfect oscillator. The nonstatistical algorithms for the Lyapunov exponent are also susceptible to distortions induced by noise. Once again surrogate data analysis or statisticallybased procedures can alleviate this problem. The largest Lyapunov exponent, , once obtained, can be converted to a fractal dimension via the KaplanYorke Conjecture: DL = e. Fractal dimensions (DL) calculated in this fashion should more precisely identified as Lyapunov dimensions to distinguish the algorithm used to produce it. 
Turbulent air flow. Produced and photographed by Candace Wark and Shirley Nannini. For more information, see their article 'Cover images: Flow visualization,' NDPLS, 21(1), 113116. 
The Hurst Exponent


The Hurst exponent, H, was first devised as a means of determining the stability of water levels in the Nile River. Water flows in and flows out, but is the net water level relatively stable or does it oscillate? To answer this question, a time series variable, X with T observations is broken into several subseries of length n; n is arbitrary. Then for each subseries, the grand mean is subtracted from X, and the differences summed. The range, R, is the difference between the maximum and minimum values of the local means. Then rescaled range, R/s = (*n/ 2)H, where s is the standard deviation of the entire series; 0 < H < 1. Actual values of H may vary somewhat due to the choice of n and the time scale represented by the individual observations. A value of H = 0.5 represents Brownian motion, meaning that the deflections in a time series can be upward or downward with equal probability on each step. Brownian motion has a Gaussian distribution and is nonstationary. Values that diverge from 0.5 in either direction are nonMarkovian, meaning that there is memory in the system beyond the first step prior to an observation. H > 0.5 denotes persistence. Deflections in a time series gravitate toward a fixed point if H is high enough. The autocorrelation of observations in a time series is positive. Values in the neighborhood of 0.75 represent pink noise or selforganizing systems. H < 0.5 denotes antipersistence; upward motions are followed by downward motions, and the autocorrelation is negative. In spite of the official range of H lying between 0 and 1, negative values have been recently reported. The negative values arose from the presence of a bifurcation in the data. It does not follow, however, that all instances of bifurcations, such as those found in catastrophe models, will always produce negative H values for a time series. Further research is required on this matter. 
Research Example 13: This time series for a cognitive task, which was performed under conditions of fatigue, displayed a negative Hurst exponent. From: Guastello, S. J., Reiter, K., Shircel, A., Timm, P., Malon, M., & Fabisch, M. (2014). The performancevariability paradox, financial decision making, and the curious case of negative Hurst exponents. NDPLS, 18, 297328. 
State Space Grids


The state space grid is a technique and computational program developed by Tom Hollenstein for identifying attractor structures in experiments with real data. As such, it is a useful alternative to the phase diagram when it is not possible to deploy algorithms that involve multidimensional projections of data. The application starts with two variables that consist of ordered categories. For instance, mother might behave in any of several ways, and the child have any of several responses. Each observation consists of a point that denotes the motherchild combination. The algorithm connects the dots in time series. The algorithm then identifies the cells that are most dense and can be interpreted as attractors. One can then conduct experiments comparing theoretically interesting conditions and make statistical associations between the number and type of attractors in the study. 
Research Example 14: An example of a state space grid depicting a highentropy and high conflict relationship, from Dishion, T. J., Forgatch, M., Van Ryzin, M., & Winter, C. (2012). Nonlinear dynamics of family problem solving in adolescence: The predictive validity of a peacheful resolution attractor. NDPLS, 16(3), 331352. 
Recurrence Plots and Analysis


Although chaotic functions are said to produce nonrepeating patterns, repeatability is really a matter of degree. Visualizing what repeats and how often can provide new insights to dynamics of a process. A recurrence plot starts with a time series. The user specifies a radius of values that are considered to be similar enough and a time lag between observations that should be plotted. If a the same value of X(t) appears after one or more lag units, a point in plotted. The variable itself appears on the diagonal. White noise would produce a plot containing a relatively solid array of dots with no patterning. An oscillator would produce diagonal stripes. More interesting deterministic functions would produce patterns; an example pattern appears at the right. One can then calculate metrics that distinguish one pattern from another such as the percentage of total recurrences arising from the deterministic process, percentage of consecutive recurrences, and the maximum length of the longest diagonal (shorter is more chaotic). Recurrence plots were first introduced as a procedure to accompany phase space analysis. New metrics, such as percent determinism, were eventually introduced, and the name of the technique morphed into recurrence quantification analysis (RQA). The new metrics were valuable for interpreting a time series. Importantly RQA analysis does not need to be accompanied by phase space analysis or assumptions about embedding versus fractal dimensions for proper interpretation. A variation on the concept is to use plots of data from two different sources (people) on the two axes instead of one source at two points in time. This crossrecurrence technique has been used as one method for studying synchronization phenomena. 
Research Example 15: Recurrence plot for real (left) and reshuffled (right) data. From Sabelli, H. (2001). Novelty, a measure of creative organization in natural and mathematical time series. NDPLS, 5(2), 89114. 
Nonlinear Dynamics in SPSS. Contains instructions for analyzing real data for hypotheses concerning catastrophe models, Lyapunov exponents and chaos, bifurcation effects, and attractor structures using subprograms in the Statistical Package for the Social Sciences (SPSS) for polynomial regression and nonlinear regression.
Nonlinear Statistical Theory


There is another genre of analysis that starts with a relatively firm hypothesis that a particular nonlinear function is inherent in the data. The function could be chaotic or reflect other types of dynamics. In the particular case of chaotic data, the objective is to separate chaos from noise, just as one would separate a linear trend from noise in a conventional regression analysis. Consistent with four goals of inferential statistics, the regressionbased analyses can predict points, identify the nonlinear dynamics in the data, report a measure of effect size, and determine statistical significance of the parts of the respective models. The next subsections of this exposition address issues concerning probability density functions, the structure of behavioral measurements, stationarity of time series, and what can be done to serve the ultimate objectives. Students of the late 20th century behavioral sciences were taught to divide their probability distributions into four categories: normal (Gaussian) distributions, those that would be normal when the sample sizes became larger, those that would be normal if transformations were employed, and those that were so aberrant that nonparametric statistics were the only cure. In the NDS paradigm, however, one is encouraged to assume specific alternative distributions such as power law, exponential, and complex exponential distributions. To take things a step further, any differential function can be rendered as a unique distribution in the exponential family, and the presence of an exponential distributions or a power law distribution in a time series variable denotes a nonlinear function contained therein. Dependent error in a dynamical process, which was introduced earlier, might occur like this: Imagine we have a measurement that is iterating through a process such that X2 = f(X1). The function produces X3, X4, etc. the same way. Now let a random shock of some sort intrude at X4. At the moment the shock arrives, the error is IID. At the next iteration, however, X5 = f(X4 + e); the error continues to iterate with the true score through the ensuing time series. Other ways for dependent error to occur are when errors are autocorrelated or when complex lag effects are in play such that X(t) = f[X(t1), X(t3)]. Fortunately there is a proof due to William Brock and colleagues showing that the presence of dependent error in the residuals of a linear autocorrelation is a positive indicator of nonlinearity. Furthermore, if a goodenough nonlinear function is specified for the true score, the dependent error is reduced to a minimum. So, what does it take to specify a goodenough nonlinear function? Researchers should have the dynamics for their theory worked out in sufficient detail. To do so requires study of the extant literature on the particular application. Fortunately there are some groups of options that have some degrees of flexibility. Consider two examples: Example 1: z = b0 + b1z13 + b2Bz1 + b3A Example 2: z2 = 1Bz1*exp(2z1) + 3 where z is the dependent variable (order parameter) that is measured at two or more points in time, z is a change in the dependent variable, A and B are control (independent) variables, bi are linear regression weights, and i are nonlinear regression weights. For models similar to Examples 1 and 2, data are prepared by setting a zero point and a standard calibration of scale for all variables in the model. Thus the dependent variable is represented by z instead of the conventional X or Y. Any error associated with approximating a differential function from a difference function becomes part of [1 R2]. The use of R2 in this context is predicated on the use of least squares statistical analysis, which is an effective and very reasonable approach to nonlinear statistical analysis. Example 1 is a cusp catastrophe executed with ordinary polynomial regression. Example 2 is part of a series of exponential models developed by Stephen Guastello that is executed through nonlinear regression. In Example 2, 2 corresponds to the largest Lyapunov exponent; if 2 is positive and 3, the constant, is negative, then both expanding and contracting properties exist in the data set. Expanding and contracting trajectories denote chaos. It is also possible to expand the model by substituting a second exponential function for 3. There is also a series of model structures for determining oscillators and coupled oscillators that was developed by Steven Boker, Jonathan Butner and colleagues; the essential concepts of nonlinear time series analysis apply to these structures as well. The results of the nonlinear models should be compared against alternative theoretical models. The researcher is looking for a higher degree of fit between the model and the data compared to the alternatives, and all the parts of the nonlinear model should be supported as well. The alternatives are often linear but not always so. 
Maximum Likelihood Methods


Jonathan Butner and colleagues have been experimenting with new adaptations of growth mixture modeling, multilevel modeling, and latent class analyses for identifying dynamics in data. The essential problem that they are addressing is that one might have no clue (hypothesis) in advance as to what combinations of attractors, bifurcations, or saddles, might be lurking in the data. The first two diagrams at the right are time series plots of two variables in a system they were studying. The third is a vector and density plot of the two variables. 
Research Example 16: Time series for two system variables (upper), and a vectoranddensity plot of the two variables (lower). From Wiltshire, T. J., Butner, J. E., & Pirtle, Z. (2017). Modeling change in project duraction and completion: scheduling dyanmics of NASA's Exploration Flight Test 1 (EFT1) activities. NDPLS, 21(3), 335358. 
Markov Chains


The concept of Markov chains originated outside the realm of nonlinear science. The central idea is that the researcher is observing objects or people in a finite set of possible states. Objects all have odds of moving from one state to another. The State X State matrix of odds is a transition matrix. The analysis establishes the transition matrices and determines the arrival of objects into states. Stephen Merrill illustrated that some combinations of transitions could result in fixed points, oscillators, bifurcations, or chaotic outcomes. Thus Markov chain analysis now falls into the scope of nonlinear dynamical analyses. There is also a subtle connection between Markov chain analyses and the methods of symbolic dynamics that have been deployed for real data in the behavioral sciences thus far. 
Orbital Decomposition v2.4 by Anthony F. Peressini & Stephen J. Guastello. A symbolic dynamics routine for determining patterns in nominally coded (categorical states) time series data. The standard routine computes pattern length and optimal solutions; topological, Shannon and Kolmogorov Sinai entropy, Lyapunov dimensions, and statistics for goodness of fit. Version 2.4 now allows you to decipher patterns from multiple categorical variables.
Be sure to read the instructions before downloading the program, which is available in PC and MAC formats. The three test data sets are .txt files: data1, evendemo, ragdemo.
Symbolic Dynamics


Symbolic dynamics is an area of mathematics that finds patterns in series of qualitative data. The elementary patterns themselves can be treated like qualitative states and analyzed for higher order patterns. This class of techniques is ideally suited to analyzing chaotic and related complex nonlinear dynamics, either in the form of continuously valued time series or qualitative categorical data. Symbolic dynamics are particularity useful in situations in which discontinuities, continuities, periodic functions, and unnamable transients could coexist within a relatively short time series. For continuous data, events such as spikes and small or large uptrends and downtrends are coded nominally (e.g., with letter codes A, B, C, D, etc.) and then analyzed. For categorical data, the categories, which should be theoretically relevant, are also given letter codes, and the computations are carried out essentially the same way. The techniques that are available vary in their means for determining symbol sequences and the length of those sequences. Orbital Decomposition (ORBDE) analysis, which was developed by Stephen Guastello and colleagues, can disentangle periodic patterns that contribute to a globally chaotic time series. It is particularly good for empirically determining the optimal pattern length. It includes entropy metrics and tests for determining the extent to which the patterns that were isolated by the analysis deviate from chance levels of occurrence. In this way it can distinguish between chaotic and random sequences. Topological entropy is the primary entropy metric used for determining pattern length. It approximates the Lyapunov exponent under limiting conditions. Unlike Shannon entropy, which is also reported in the analysis, the topological entropy metric preserves the temporal sequence of the events that are being extracted. The ORBDE software is available from the link at the left. The current version (2.4) allows analysis for multiple categorical variables to be evaluated simultaneously. One can also apply varying numbers of codes to a single event. For instance, a short utterance in a conversation between two or more people might have only one category of content (e.g. asking a question), but a longer utterance might contain several categories of content. KomolgorovSinai entropy, which is an expansion of Shannon entropy, is calculated for the multiplevariable analyses. 